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PDP-10 Archives
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decuslib20-07
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decus/20-0173/exam.ple
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13:42:38 BAJOB BATCON version 13(1071) running EXA sequence 13499 in stream 1 for DGARFINKEL
13:42:38 BAFIL Input from DSKB0:EXAMPL.CMD[102,4]
13:42:38 BAFIL Output to DSKB0:EXA.LOG[102,4]
13:42:38 BASUM Job parameters
Time:00:05:00 Core:99K Unique:YES Restart:NO
13:42:38 MONTR
13:42:38 MONTR .LOGIN 102/4
13:42:39 USER JOB 15 MEDICAL SCHOOL 701 KL TTY77
13:42:39 USER %(1)LGNPWE PPN will expire on 30-Nov-83
13:42:39 USER [LGNJSP Other jobs same PPN:19]
13:42:39 USER 13:42 17-Nov-83 Thur
13:42:41 MONTR
13:42:41 MONTR ..; this is an actual command file in tops -10,
13:42:41 MONTR ..; executed through the batch job processor.;
13:42:41 MONTR ..; It is designed to offer you an example of
13:42:41 MONTR ..; how you would compile and run an example of
13:42:42 MONTR ..; PENNZYME under our system.;
13:42:42 MONTR ..;
13:42:42 MONTR ..;
13:42:42 MONTR ..; PLEASE IGNORE THIS INITIAL COMMANDS
13:42:42 MONTR ..MOUNT DS14:
13:42:44 USER Request queued to mount units
13:42:44 USER Please wait ...
13:43:59 USER
13:43:59 USER DS14 Mounted
13:44:00 MONTR
13:44:00 MONTR ..R SS
13:44:00 USER
13:44:00 USER
13:44:00 USER *C DS14:
13:44:00 USER
13:44:00 USER *CP [102,4,PENNZY]
13:44:00 USER
13:44:00 USER *
13:44:01 MONTR ..;
13:44:01 MONTR ..; OK, NOW THE EXAMPLE STARTS:
13:44:01 MONTR ..compile comm.for
13:44:02 MONTR
13:44:02 MONTR ..compile graprm.for
13:44:02 MONTR
13:44:02 MONTR ..; remember, you need these two first
13:44:02 MONTR ..;
13:44:02 MONTR ..compile @epfgra
13:44:07 MONTR
13:44:07 MONTR ..;
13:44:07 MONTR ..;
13:44:07 MONTR ..;
13:44:07 MONTR ..;
13:44:07 MONTR ..; NOW, WE CAN START AN EXECUTION TRY:
13:44:08 MONTR ..; FIRST, LETS SEE THE PARMETER FILE
13:44:08 MONTR ..ty test1.par
13:44:08 USER EXAMPLE
13:44:08 USER 2
13:44:08 USER KM 0.15
13:44:08 USER VMAX 1
13:44:08 MONTR
13:44:08 MONTR ..;
13:44:09 MONTR ..; CONVERT THAT TO A FORTRAN FILE
13:44:09 MONTR ..copy for01.dat = test1.par
13:44:09 MONTR
13:44:09 MONTR ..;
13:44:09 MONTR ..;
13:44:10 MONTR ..;
13:44:10 MONTR ..; NOW, LET'S SEE THE DATA FILE:
13:44:10 MONTR ..ty test20.dat
13:44:10 USER 1,5
13:44:10 USER A
13:44:10 USER 0.1 0.30
13:44:10 USER 0.2 0.60
13:44:10 USER 0.5 0.80
13:44:10 USER 0.75 0.85
13:44:10 USER 1.0 0.90
13:44:10 MONTR
13:44:10 MONTR ..;
13:44:11 MONTR ..; CONVERT THAT TO A FORTRAN FILE:
13:44:11 MONTR ..copy for20.dat = test20.dat
13:44:11 MONTR
13:44:11 MONTR ..;
13:44:11 MONTR ..;
13:44:11 MONTR ..; WE NEED A RATE LAW FILE, LET'S CHOOSE TEST1.RAT
13:44:11 MONTR ..ty test1.rat
13:44:12 USER FUNCTION RATE(PCONC,PARAM)
13:44:12 USER
13:44:12 USER
13:44:12 USER C DUMMY VARIABLES:
13:44:12 USER C PCONC CONCENTRATION ARRAY.
13:44:12 USER C PARAM PARAMETER ARRAY.
13:44:12 USER
13:44:12 USER DIMENSION PCONC(1),PARAM(1)
13:44:12 USER DATA QSMALL/1E-35/
13:44:12 USER
13:44:12 USER
13:44:12 USER IF (PCONC(1).LE.QSMALL) GO TO 100
13:44:12 USER C---- ELSE, CALCULATE THE REACTION RATE.
13:44:12 USER QA=PARAM(1)/PCONC(1)
13:44:12 USER
13:44:12 USER RATE=PARAM(2)/(1+QA)
13:44:12 USER
13:44:12 USER GO TO 110
13:44:12 USER C---- THEN, THE RATE WOULD HAVE BEEN ZERO.
13:44:12 USER 100 RATE = 0.0
13:44:12 USER 110 CONTINUE
13:44:12 USER
13:44:12 USER
13:44:12 USER RETURN
13:44:12 USER
13:44:12 USER END
13:44:12 MONTR
13:44:12 MONTR ..;
13:44:12 MONTR ..;
13:44:12 MONTR ..;
13:44:13 MONTR ..; WE NEED TO COMPILE THE RATE LAW SUBROUTINE
13:44:13 MONTR ..compile test1.rat
13:44:13 MONTR
13:44:13 MONTR ..;
13:44:13 MONTR ..;
13:44:13 MONTR ..; FINALLY, EXECUTE THE PENNZYME PROGRAM:
13:44:13 MONTR ..ex @epfgra,test1.rel
13:44:17 USER LINK: Loading
13:44:23 USER %LNKMDS Multiply-defined global symbol SYMBOL
13:44:25 USER Detected in module SYMBOL from file SYS:FORLIB.REL[1,4]
13:44:25 USER Defined value = 147352, this value = 151261
13:44:26 USER %LNKMDS Multiply-defined global symbol CONVER
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 151617, this value = 156523
13:44:26 USER %LNKMDS Multiply-defined global symbol PLOT
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 147341, this value = 155746
13:44:26 USER %LNKMDS Multiply-defined global symbol PLOTS
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 147336, this value = 155673
13:44:26 USER %LNKMDS Multiply-defined global symbol SYMBLX
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 151257, this value = 157650
13:44:26 USER %LNKMDS Multiply-defined global symbol SYMBOL
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 147352, this value = 157656
13:44:26 USER %LNKMDS Multiply-defined global symbol USYMB
13:44:26 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:26 USER Defined value = 151255, this value = 157653
13:44:26 USER %LNKMDS Multiply-defined global symbol WHICH
13:44:28 USER Detected in module CALPLT from file SYS:FORLIB.REL[1,4]
13:44:28 USER Defined value = 147326, this value = 155637
13:44:28 USER [LNKXCT EPF1MN execution]
13:44:29 USER
13:44:29 USER EL
13:44:29 USER ENTER DESIRED OPTION > DATA
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER
13:44:29 USER **********************************************************************
13:44:29 USER * EXAMPLE *
13:44:29 USER * INPUT DATA *
13:44:29 USER **********************************************************************
13:44:29 USER
13:44:29 USER
13:44:29 USER NUMBER OF PARAMETERS NUMBER OF CHEMICALS NUMBER OF EXPERIMENTS
13:44:29 USER 2 1 5
13:44:29 USER
13:44:29 USER OBSERVED STANDARD
13:44:29 USER CHEMICAL CONCENTRATIONS VELOCITY DEVIATION
13:44:29 USER POINT 1
13:44:30 USER SET # 1
13:44:30 USER 1 0.1000 0.3000 0.0000
13:44:30 USER 2 0.2000 0.6000 0.0000
13:44:30 USER 3 0.5000 0.8000 0.0000
13:44:30 USER 4 0.7500 0.8500 0.0000
13:44:30 USER 5 1.0000 0.9000 0.0000
13:44:30 USER
13:44:30 USER EL
13:44:30 USER ENTER DESIRED OPTION > SIMPLEX
13:44:31 USER
13:44:31 USER EL
13:44:31 USER ENTER DESIRED OPTION > SMPRPT
13:44:31 USER
13:44:31 USER
13:44:31 USER ----------------------------------------------------------------------
13:44:31 USER
13:44:31 USER
13:44:31 USER FITTING BY SIMPLEX METHOD.
13:44:31 USER
13:44:31 USER CONVERGENCE ACHIEVED AFTER 10 ITERATIONS.
13:44:31 USER -ELAPSED CPU TIME: 0 MIN 0.0 SEC
13:44:31 USER
13:44:31 USER
13:44:31 USER RMS RELATIVE DEVIATION TARGET ACTUAL
13:44:31 USER ABOUT THE CENTROID OF -
13:44:31 USER -KINETIC PARAMETERS: 5.00000E-02 3.88043E-02
13:44:32 USER
13:44:32 USER
13:44:32 USER LEAST-SQUARES ERROR: START 6.57448E-02 END 5.09470E-02
13:44:32 USER PERCENT REDUCTION: 22.51%
13:44:32 USER
13:44:32 USER
13:44:32 USER OPTIMAL PARAMETER VALUES WERE:
13:44:32 USER KM 1.93831E-01
13:44:32 USER VMAX 1.07967E+00
13:44:32 USER
13:44:32 USER EL
13:44:32 USER ENTER DESIRED OPTION > FP
13:44:32 USER MATSET COMPUTING H-MATRIX
13:44:32 USER MATSET COMPUTING H-MATRIX
13:44:32 USER MATDIA COMPUTING H-MATRIX
13:44:32 USER
13:44:32 USER EL
13:44:32 USER ENTER DESIRED OPTION > FPRPT
13:44:32 USER
13:44:32 USER
13:44:32 USER ----------------------------------------------------------------------
13:44:32 USER
13:44:32 USER
13:44:32 USER FITTING BY FLETCHER-POWELL METHOD.
13:44:32 USER
13:44:32 USER CONVERGENCE ACHIEVED AFTER 5 ITERATIONS.
13:44:33 USER -ELAPSED CPU TIME: 0 MIN 0.0 SEC
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER LEAST-SQUARES ERROR: START 5.09470E-02 END 5.04924E-02
13:44:33 USER PERCENT REDUCTION: 0.89%
13:44:33 USER
13:44:33 USER
13:44:33 USER OPTIMAL PARAMETER VALUES WERE:
13:44:33 USER KM 2.02510E-01
13:44:33 USER VMAX 1.09665E+00
13:44:33 USER
13:44:33 USER EL
13:44:33 USER ENTER DESIRED OPTION > STATS
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER
13:44:33 USER **********************************************************************
13:44:33 USER * EXAMPLE *
13:44:33 USER * STATISTICS REPORT *
13:44:34 USER **********************************************************************
13:44:34 USER
13:44:34 USER
13:44:34 USER
13:44:34 USER
13:44:34 USER RESIDUAL ERROR: 5.04924E-02
13:44:34 USER AVERAGE OBSERVED VELOCITY: 6.90000E-01
13:44:34 USER (RES. ERR.)/(AV. VEL.) = RELATIVE ERROR: 7.31774E-02
13:44:34 USER
13:44:34 USER
13:44:34 USER PARAMETER
13:44:34 USER NAME VALUE STD. DEV. CNFD. LIM. T-STATISTIC < T(.95)
13:44:34 USER
13:44:34 USER KM 2.02510E-01 4.388E-02 1.396E-01 4.61470E+00
13:44:34 USER VMAX 1.09665E+00 7.253E-02 2.308E-01 1.51206E+01
13:44:34 USER
13:44:34 USER EL
13:44:34 USER ENTER DESIRED OPTION > VARCOV
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER **********************************************************************
13:44:35 USER * EXAMPLE *
13:44:35 USER * VAR-COVAR MATRIX *
13:44:35 USER **********************************************************************
13:44:35 USER KM VMAX
13:44:35 USER 1.9258E-03 2.8097E-03 KM
13:44:35 USER 5.2601E-03 VMAX
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER
13:44:35 USER **********************************************************************
13:44:35 USER * EXAMPLE *
13:44:35 USER * NORM. VAR-COVAR MATRIX *
13:44:35 USER **********************************************************************
13:44:35 USER KM VMAX
13:44:35 USER 1.0000E+00 8.8280E-01 KM
13:44:35 USER 1.0000E+00 VMAX
13:44:36 USER
13:44:36 USER
13:44:36 USER EL
13:44:36 USER ENTER DESIRED OPTION > QUIT
13:44:36 USER
13:44:36 USER CPU time 1.20 Elapsed time 7.75
13:44:36 MONTR
13:44:36 MONTR EXIT
13:44:36 MONTR
13:44:36 MONTR ..; I HOPE THIS WILL HELP YOU
13:44:36 MONTR ..; IGNORE THIS LAST COMMANDS:
13:44:37 MONTR ..DISMOUNT DS14:/NOREMOVE
13:44:38 USER DS14 Dismounted
13:44:38 MONTR
13:44:38 MONTR ..k/f
13:44:38 MONTR OTHER JOBS SAME PPN
13:44:38 MONTR Job 15, User [102,4] Logged off TTY77 1344 17-Nov-83
13:44:38 MONTR Another job still logged in under [102,4]
13:44:38 MONTR Runtime 8.47 Sec